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PRE 2009 ANNUAL INDEX - VOLUMES 79 and 80 Section T
Viscous effects on Bragg scattering of water waves by an array of piles PACS: 47.90.+a 47.35.-i 92.10.Hm 42.79.Dj Phys. Rev. E 79, 026314 (2009) [abstract]
Effects of rarefaction in microflows between coaxial cylinders PACS: 47.10.ab 51.10.+y 47.45.-n 05.70.Ln Phys. Rev. E 80, 066317 (2009) [abstract]
Large Hadron Collider at CERN: Beams generating high-energy-density matter PACS: 51.50.+v 51.60.+a Phys. Rev. E 79, 046410 (2009) [abstract]
see [Piriz,A.R., Phys. Rev. E 80, 046305 (2009)]
Self-organization of feed-forward structure and entrainment in excitatory neural networks with spike-timing-dependent plasticity PACS: 87.19.lj 87.18.Sn 87.19.lw Phys. Rev. E 79, 051904 (2009) [abstract]
see [Odagiri,Kenta, Phys. Rev. E 79, 056219 (2009)]
see [Watanabe,Kota, Phys. Rev. E 80, 056110 (2009)]
see [Watanabe,Kota, Phys. Rev. E 80, 056110 (2009)]
Analysis of the growth process of gold nanorods with time-resolved observation PACS: 81.10.Aj 61.46.Km 82.20.Pm Phys. Rev. E 80, 020601(R) (2009) [abstract]
see [Nagahara,Hiroki, Phys. Rev. E 80, 021906 (2009)]
Experimental realization of directed percolation criticality in turbulent liquid crystals PACS: 64.60.Ht 64.70.mj 47.27.Cn 05.45.-a Phys. Rev. E 80, 051116 (2009) [abstract]
see [Dhara,Surajit, Phys. Rev. E 79, 060701(R) (2009)] see [Tanaka,Shingo, Phys. Rev. E 80, 021702 (2009)]
Intensity and polarization of laser-induced fluorescence due to forbidden excitation of He atoms immersed in an electric field in plasmas PACS: 52.70.-m 32.60.+i 52.80.-s 52.20.Hv Phys. Rev. E 79, 026402 (2009) [abstract]
Dry and wet interfaces: Influence of solvent particles on molecular recognition PACS: 87.15.A- 89.20.-a Phys. Rev. E 79, 041908 (2009) [abstract]
Predicting synchrony in heterogeneous pulse coupled oscillators PACS: 87.19.xm 87.85.dm Phys. Rev. E 80, 021908 (2009) [abstract]
Erratum: Statistics of work performed on a forced quantum oscillator [Phys. Rev. E \textbf{78}, 011115 (2008)] PACS: 05.30.-d 05.70.Ln 05.40.-a 99.10.Cd Phys. Rev. E 79, 039902(E) (2009) [abstract]
see [Ingold,Gert-Ludwig, Phys. Rev. E 79, 061105 (2009)]
Steady-state, simultaneous two-phase flow in porous media: An experimental study PACS: 47.56.+r 47.55.dd 47.55.Ca 89.75.Fb Phys. Rev. E 80, 036308 (2009) [abstract]
Surface anchoring structure of a liquid crystal monolayer studied via dual polarization interferometry PACS: 61.30.Hn Phys. Rev. E 79, 021703 (2009) [abstract]
Electroconvection in nematic mixtures of bent-core and calamitic molecules PACS: 61.30.Gd 47.54.-r 47.20.Lz Phys. Rev. E 80, 021702 (2009) [abstract]
Lattice Boltzmann model for thermal transpiration PACS: 05.10.-a 47.45.-n 47.61.-k Phys. Rev. E 79, 027701 (2009) [abstract]
see [Li,Q., Phys. Rev. E 80, 037702 (2009)]
Noise effect on persistence of memory in a positive-feedback gene regulatory circuit PACS: 87.18.Tt 05.40.Ca 05.70.Fh Phys. Rev. E 80, 011907 (2009) [abstract]
Influence of dynamical condensation on epidemic spreading in scale-free networks PACS: 89.75.Hc 87.23.Ge 87.19.X- 05.70.Fh Phys. Rev. E 79, 016108 (2009) [abstract]
Ming Tang, Zonghua Liu, Xiaoming Liang, and P.M. Hui
see [Liang,Xiaoming, Phys. Rev. E 80, 066202 (2009)]
see [Huang,Yongsheng, Phys. Rev. E 80, 056403 (2009)]
Fingering and pressure distribution in lifting Hele-Shaw cells with grooves: A computer simulation study PACS: 47.15.gp 47.54.-r 07.05.Tp Phys. Rev. E 80, 026315 (2009) [abstract]
Long-lasting desynchronization in rat hippocampal slice induced by coordinated reset stimulation PACS: 87.19.L- 05.40.Ca 05.45.Xt 84.35.+i Phys. Rev. E 80, 011902 (2009) [abstract]
Structure and phase diagram of self-assembled rigid rods: Equilibrium polydispersity and nematic ordering in two dimensions PACS: 64.75.Yz 61.20.Ja 64.70.mf 82.70.Dd Phys. Rev. E 79, 021505 (2009) [abstract]
J.M. Tavares, P.I.C. Teixeira, and M.M. Telo da Gama
All-or-none proteinlike folding transition of a flexible homopolymer chain PACS: 64.70.km 05.10.-a 64.60.an 87.15.Cc Phys. Rev. E 79, 050801(R) (2009) [abstract]
see [Allahyarov,Elshad, Phys. Rev. E 80, 061802 (2009)]
Energy transfer in anisotropic magnetohydrodynamic turbulence PACS: 47.65.-d 47.27.ek 47.27.er Phys. Rev. E 79, 046312 (2009) [abstract]
Simulation and theory of hybrid aligned liquid crystal films PACS: 64.70.mf 68.08.-p 61.30.Hn Phys. Rev. E 79, 011709 (2009) [abstract]
see [Tavares,J.M., Phys. Rev. E 80, 021506 (2009)]
Earthquake size-frequency statistics in a forest-fire model of individual faults PACS: 64.60.av 91.30.Dk Phys. Rev. E 79, 046102 (2009) [abstract]
Global mean first-passage times of random walks on complex networks PACS: 89.75.Hc 05.40.Fb Phys. Rev. E 80, 065104(R) (2009) [abstract]
Noise effects in the ac-driven Frenkel-Kontorova model PACS: 05.45.-a 45.05.+x Phys. Rev. E 79, 036604 (2009) [abstract]
see [Daitche,Anton, Phys. Rev. E 79, 016210 (2009)] see [Zahnow,Jens C., Phys. Rev. E 80, 026311 (2009)]
see [Tavares,J.M., Phys. Rev. E 80, 021506 (2009)] see [Silvestre,N.M., Phys. Rev. E 80, 041708 (2009)]
Translocation of a stiff polymer in a microchannel PACS: 87.15.hj 87.16.ad 87.16.dp Phys. Rev. E 79, 011903 (2009) [abstract]
Onset of unidirectional pulse propagation in an excitable medium with asymmetric heterogeneity PACS: 82.40.Bj 68.35.Fx 82.20.Wt 89.75.Kd Phys. Rev. E 79, 046205 (2009) [abstract]
Takashi Teramoto, Katsuya Suzuki, and Yasumasa Nishiura
Growing length scale in gravity-driven dense granular flow PACS: 45.70.-n 81.05.Rm 83.10.Pp Phys. Rev. E 79, 011303 (2009) [abstract]
Coarsening through directed droplet coalescence in fluid-fluid phase separation PACS: 83.80.Xz 64.70.M- 64.75.Cd Phys. Rev. E 80, 011708 (2009) [abstract]
see [Lancaster,K.L., Phys. Rev. E 80, 045401(R) (2009)]
G. Theocharis, M. Kavousanakis, P.G. Kevrekidis, Chiara Daraio, Mason A. Porter,
and I.G. Kevrekidis
Exact algorithm for sampling the two-dimensional Ising spin glass PACS: 05.10.-a 75.10.Nr 02.70.-c Phys. Rev. E 80, 046708 (2009) [abstract]
Absence of Marangoni convection at Marangoni numbers above 27,000 during water evaporation PACS: 47.20.Dr 47.55.dm Phys. Rev. E 80, 056308 (2009) [abstract]
see [Malinouskaya,I., Phys. Rev. E 80, 011304 (2009)]
Bao-Mei Tian, Han-Xin Yang, Wei Li, Wen-Xu Wang, Bing-Hong Wang, and Tao Zhou
Bao-Mei Tian, Han-Xin Yang, Wei Li, Wen-Xu Wang, Bing-Hong Wang, and Tao Zhou
Interlinking positive and negative feedback loops creates a tunable motif in gene regulatory networks PACS: 87.16.Yc 05.45.-a 87.17.Aa Phys. Rev. E 80, 011926 (2009) [abstract]
Overdamped dynamics of paramagnetic ellipsoids in a precessing magnetic field PACS: 83.80.Gv 47.57.J- 05.60.Cd Phys. Rev. E 79, 021501 (2009) [abstract]
Pietro Tierno, Tom H. Johansen, and Francesc Sagu\'{e}s
see [Reuter,K., Phys. Rev. E 80, 056304 (2009)]
Quantum signatures of non-Newtonian orbits in the asymmetric infinite square well PACS: 05.45.Mt 03.65.Sq 42.50.Md Phys. Rev. E 79, 036213 (2009) [abstract]
Random transition-rate matrices for the master equation PACS: 02.50.-r 05.40.-a 02.10.Yn 05.10.-a Phys. Rev. E 80, 021140 (2009) [abstract]
see [Jachan,Michael, Phys. Rev. E 80, 011138 (2009)]
Generalized Sznajd model for opinion propagation PACS: 02.50.Ey 02.60.Cb 05.45.-a 89.65.-s Phys. Rev. E 80, 021119 (2009) [abstract]
Hybrid lattice Boltzmann model for binary fluid mixtures PACS: 47.11.-j 64.75.-g Phys. Rev. E 80, 026701 (2009) [abstract]
Ugur Tirnakli, Constantino Tsallis, and Christian Beck
Dynamics of colloids in a narrow channel driven by a nonuniform force PACS: 82.70.Dd 64.60.Cn Phys. Rev. E 80, 051401 (2009) [abstract]
Diffusion, dimensionality, and noise in transcriptional regulation PACS: 87.15.Vv 87.16.Xa 87.18.Tt Phys. Rev. E 79, 051901 (2009) [abstract]
Ga\v{s}per Tka\v{c}ik, Aleksandra M. Walczak, and William Bialek
Broad lifetime distributions for ordering dynamics in complex networks PACS: 89.75.Hc 89.65.-s 89.75.Fb Phys. Rev. E 79, 016109 (2009) [abstract]
Universality in multicomponent glass-forming liquids near the glass transition PACS: 64.70.P- 66.10.C- 61.20.Ja 83.10.Mj Phys. Rev. E 80, 031503 (2009) [abstract]
see [Chen,Sheng, Phys. Rev. E 80, 016702 (2009)] see [Chen,Sheng, Phys. Rev. E 80, 026702 (2009)]
Binding free energy and counterion release for adsorption of the antimicrobial peptide lactoferricin B on a POPG membrane PACS: 87.15.A- 87.15.B- Phys. Rev. E 80, 031911 (2009) [abstract]
Role of noise in population dynamics cycles PACS: 05.40.-a 87.10.Hk 02.50.Ey Phys. Rev. E 79, 061128 (2009) [abstract]
Trapping probability analysis of a DNA trap using electric and hydrodrag force fields in tapered microchannels PACS: 87.80.-y 87.15.-v 87.90.+y Phys. Rev. E 79, 051902 (2009) [abstract]
see [Yanagisawa,Daichi, Phys. Rev. E 80, 036110 (2009)]
see [Goletz,Christoph-Marian, Phys. Rev. E 80, 031101 (2009)]
see [Chen,Wei, Phys. Rev. E 79, 041403 (2009)] see [Xiong,Xiaomin, Phys. Rev. E 80, 061604 (2009)]
Perturbation analysis of the Kuramoto phase-diffusion equation subject to quenched frequency disorder PACS: 82.40.Ck 05.45.Xt Phys. Rev. E 79, 016112 (2009) [abstract]
Ralf T{\"o}njes and Bernd Blasius
Subparticle stress fields in granular solids PACS: 45.70.-n 61.43.-j 83.80.Fg Phys. Rev. E 79, 051302 (2009) [abstract]
see [Calamai,Massimo, Phys. Rev. E 80, 036209 (2009)]
see [Gevertz,Jana, Phys. Rev. E 80, 011102 (2009)]
S. Torquato and Y. Jiao
see [Gevertz,Jana, Phys. Rev. E 80, 051910 (2009)]
see [Scardicchio,Antonello, Phys. Rev. E 79, 041108 (2009)] see [Batten,Robert D., Phys. Rev. E 80, 031105 (2009)]
Simulation of the time evolution of the Wigner function with a first-principles Monte Carlo method PACS: 02.70.Ss 02.50.Ga 05.10.Ln 02.50.Ey Phys. Rev. E 80, 036701 (2009) [abstract]
Fabricio Toscano, Ra\'ul O. Vallejos, and Diego Wisniacki
Rita Toth, Ben de Lacy Costello, Christopher Stone, Jonathan Masere, Andrew Adamatzky,
and Larry Bull
Anomalous fluctuation properties PACS: 05.40.-a 02.50.-r 05.70.-a Phys. Rev. E 80, 011114 (2009) [abstract]
Temperature and pressure spikes in ion-beam cancer therapy PACS: 87.53.-j 72.15.Cz 61.80.-x 41.75.Ak Phys. Rev. E 80, 031913 (2009) [abstract]
Nonlinear effects for coda-type elastic waves in stressed granular media PACS: 45.70.-n 46.40.Cd 43.25.+y Phys. Rev. E 80, 011306 (2009) [abstract]
Community detection in networks with positive and negative links PACS: 89.75.Hc 89.65.-s Phys. Rev. E 80, 036115 (2009) [abstract]
Number of degrees of freedom of two-dimensional turbulence PACS: 47.27.-i 05.45.-a Phys. Rev. E 79, 056308 (2009) [abstract]
Liquid meniscus oscillation and drop ejection by ac voltage, pulsed dc voltage, and superimposing dc to ac voltages PACS: 47.65.-d 47.85.Dh 47.85.M- Phys. Rev. E 80, 026318 (2009) [abstract]
see [Devlin,Stephen, Phys. Rev. E 80, 026105 (2009)] see [Devlin,Stephen, Phys. Rev. E 80, 029902(E) (2009)]
Higher-order large-time asymptotics for a reaction of the form $nA+mB \rightarrow C$ PACS: 82.20.Db 82.40.-g Phys. Rev. E 79, 016105 (2009) [abstract]
P.M.J. Trevelyan
P.M.J. Trevelyan
Wave-breaking limits for nonquasistatic oscillations in a warm one-dimensional electron plasma PACS: 52.35.Mw 52.27.Ny Phys. Rev. E 79, 056406 (2009) [abstract]
Momentum-shell renormalization-group flow from simulation PACS: 05.10.Ln 05.10.Cc Phys. Rev. E 79, 036707 (2009) [abstract]
see [Krekelberg,William P., Phys. Rev. E 80, 061205 (2009)]
Counterion condensation of differently flexible polyelectrolytes in aqueous solutions in the dilute and semidilute regime PACS: 82.35.Rs 36.20.-r Phys. Rev. E 79, 011804 (2009) [abstract]
Photonic crystal fiber in the polychaete worm \textit{Pherusa} sp. PACS: 87.90.+y 42.70.Qs Phys. Rev. E 80, 061908 (2009) [abstract]
Local elasticity map and plasticity in a model Lennard-Jones glass PACS: 62.20.F- 62.20.de 62.25.-g 71.55.Jv Phys. Rev. E 80, 026112 (2009) [abstract]
Forced-dissipative two-dimensional turbulence: A scaling regime controlled by drag PACS: 47.27.-i Phys. Rev. E 79, 045308(R) (2009) [abstract]
Yue-Kin Tsang
Elastic energy of protein-DNA chimeras PACS: 87.15.-v 81.07.-b 87.85.G- Phys. Rev. E 80, 061912 (2009) [abstract]
see [Molina,M.I., Phys. Rev. E 80, 046605 (2009)]
Higher-order effects and ultrashort solitons in left-handed metamaterials PACS: 41.20.Jb 42.65.Tg 78.20.Ci Phys. Rev. E 79, 037601 (2009) [abstract]
Anomalies of liquid water at low temperature due to two types of hydrogen bonds PACS: 07.05.Tp 61.20.Ja 05.70.Jk 64.60.My Phys. Rev. E 79, 016707 (2009) [abstract]
Inhibition and modulation of rhythmic neuronal spiking by noise PACS: 87.19.lc 05.40.-a Phys. Rev. E 80, 031907 (2009) [abstract]
Curvature effects on the adsorption of aqueous sodium-dodecyl-sulfate surfactants on carbonaceous substrates: Structural features and counterion dynamics PACS: 82.70.Dd Phys. Rev. E 80, 021408 (2009) [abstract]
Complexity and synchronization PACS: 05.40.-a 02.50.Ey Phys. Rev. E 80, 021110 (2009) [abstract]
Implications of an inverse branching aftershock sequence model PACS: 46.50.+a 89.75.Da 91.30.Px Phys. Rev. E 79, 016101 (2009) [abstract]
Relations between entropies produced in nondeterministic thermodynamic processes PACS: 05.20.-y 05.30.-d 05.90.+m Phys. Rev. E 79, 041102 (2009) [abstract]
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